STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDB2Damage specific DNA binding protein 2. (339 aa)    
Predicted Functional Partners:
ENSSARP00000007916
annotation not available
     
 0.999
ENSSARP00000003012
annotation not available
    
 0.998
CUL4B
Cullin 4B.
    
 0.994
RBX1
Ring-box 1.
    
 0.993
XPA
XPA, DNA damage recognition and repair factor.
    
 0.991
ENSSARP00000003639
annotation not available
    
 0.987
DCAF5
DDB1 and CUL4 associated factor 5.
     
 0.982
DCAF12
DDB1 and CUL4 associated factor 12.
     
 0.978
COPS5
COP9 signalosome subunit 5.
    
 0.956
ENSSARP00000006379
annotation not available
   
 0.951
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.