STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000002139annotation not available (286 aa)    
Predicted Functional Partners:
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
   
 0.875
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.824
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
   
 0.824
ENSSARP00000009880
annotation not available
   
 0.813
ENSSARP00000009876
annotation not available
   
 0.795
ENSSARP00000010828
annotation not available
   
 
 0.782
SNRPD2
Small nuclear ribonucleoprotein D2 polypeptide.
   
 0.767
ENSSARP00000011464
annotation not available
   
 0.767
ENSSARP00000008153
annotation not available
   
 0.766
SNRPD3
Small nuclear ribonucleoprotein D3 polypeptide.
   
 0.763
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.