STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOD1Myogenic differentiation 1. (210 aa)    
Predicted Functional Partners:
TCF12
Transcription factor 12.
    
 0.932
TCF4
Transcription factor 4.
    
 0.904
ENSSARP00000005061
annotation not available
    
 0.902
TBPL2
TATA-box binding protein like 2.
    
 0.872
MEF2C
Myocyte enhancer factor 2C.
    
 0.870
ENSSARP00000001737
annotation not available
    
 0.864
ENSSARP00000001916
annotation not available
    
 0.864
TBPL1
TATA-box binding protein like 1.
    
 0.864
MYOG
Myogenin.
  
 
0.839
PAX7
Paired box 7.
   
 
 0.836
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.