CENPN protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

CENPN

Centromere protein N. (338 aa)

Predicted Functional Partners:

ENSSARP00000009157

0.999

ENSSARP00000004003

0.998

ENSSARP00000008592

0.998

ENSSARP00000007302

0.997

ENSSARP00000009856

0.997

ENSSARP00000004970

0.996

ENSSARP00000012301

0.994

ENSSARP00000011101

0.992

CENPW

0.988

ENSSARP00000008182

0.988

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CENPN	CENPW	ENSSARP00000002147	ENSSARP00000000544	Centromere protein N.	Centromere protein W.	0.988
CENPN	ENSSARP00000004003	ENSSARP00000002147	ENSSARP00000004003	Centromere protein N.	annotation not available	0.998
CENPN	ENSSARP00000004970	ENSSARP00000002147	ENSSARP00000004970	Centromere protein N.	annotation not available	0.996
CENPN	ENSSARP00000007302	ENSSARP00000002147	ENSSARP00000007302	Centromere protein N.	annotation not available	0.997
CENPN	ENSSARP00000008182	ENSSARP00000002147	ENSSARP00000008182	Centromere protein N.	annotation not available	0.988
CENPN	ENSSARP00000008592	ENSSARP00000002147	ENSSARP00000008592	Centromere protein N.	annotation not available	0.998
CENPN	ENSSARP00000009157	ENSSARP00000002147	ENSSARP00000009157	Centromere protein N.	annotation not available	0.999
CENPN	ENSSARP00000009856	ENSSARP00000002147	ENSSARP00000009856	Centromere protein N.	annotation not available	0.997
CENPN	ENSSARP00000011101	ENSSARP00000002147	ENSSARP00000011101	Centromere protein N.	annotation not available	0.992
CENPN	ENSSARP00000012301	ENSSARP00000002147	ENSSARP00000012301	Centromere protein N.	annotation not available	0.994
CENPW	CENPN	ENSSARP00000000544	ENSSARP00000002147	Centromere protein W.	Centromere protein N.	0.988
CENPW	ENSSARP00000004003	ENSSARP00000000544	ENSSARP00000004003	Centromere protein W.	annotation not available	0.969
CENPW	ENSSARP00000004970	ENSSARP00000000544	ENSSARP00000004970	Centromere protein W.	annotation not available	0.981
CENPW	ENSSARP00000007302	ENSSARP00000000544	ENSSARP00000007302	Centromere protein W.	annotation not available	0.974
CENPW	ENSSARP00000008182	ENSSARP00000000544	ENSSARP00000008182	Centromere protein W.	annotation not available	0.962
CENPW	ENSSARP00000008592	ENSSARP00000000544	ENSSARP00000008592	Centromere protein W.	annotation not available	0.972
CENPW	ENSSARP00000009157	ENSSARP00000000544	ENSSARP00000009157	Centromere protein W.	annotation not available	0.976
CENPW	ENSSARP00000009856	ENSSARP00000000544	ENSSARP00000009856	Centromere protein W.	annotation not available	0.981
CENPW	ENSSARP00000011101	ENSSARP00000000544	ENSSARP00000011101	Centromere protein W.	annotation not available	0.937
CENPW	ENSSARP00000012301	ENSSARP00000000544	ENSSARP00000012301	Centromere protein W.	annotation not available	0.955