Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LPPLIM domain containing preferred translocation partner in lipoma. (612 aa)    
Predicted Functional Partners:
ENAH
ENAH actin regulator.
    
 0.857
PDLIM4
PDZ and LIM domain 4.
   
 
 0.802
LPAR2
Lysophosphatidic acid receptor 2.
    
 0.761
FERMT1
Fermitin family member 1.
    
 0.750
FERMT2
Fermitin family member 2.
    
 0.750
ENSSARP00000004587
annotation not available
    
 0.736
RBM42
RNA binding motif protein 42.
    
 0.735
ENSSARP00000010550
annotation not available
    
 0.735
PARD6A
Par-6 family cell polarity regulator alpha.
     
 0.729
ENSSARP00000002530
annotation not available
    
   0.724
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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