Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (274 aa)    
Predicted Functional Partners:
ENSSARP00000004784
annotation not available
    
   0.944
SLC35B2
Solute carrier family 35 member B2.
    
   0.887
ENSSARP00000000276
annotation not available
    
   0.819
ENSSARP00000003546
annotation not available
    
   0.819
ENSSARP00000010937
annotation not available
    
   0.819
SIL1
SIL1 nucleotide exchange factor.
    
   0.791
HSPA4
Heat shock protein family A (Hsp70) member 4.
   
   0.774
CHEK2
Checkpoint kinase 2.
      
 0.641
SLC16A4
Solute carrier family 16 member 4.
      
 0.622
ENSSARP00000007582
annotation not available
      
 0.604
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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