STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC117Coiled-coil domain containing 117. (274 aa)    
Predicted Functional Partners:
SLC16A4
Solute carrier family 16 member 4.
      
 0.752
ENSSARP00000004784
annotation not available
    
   0.751
MSANTD4
Myb/SANT DNA binding domain containing 4 with coiled-coils.
      
 0.714
PTAFR
Platelet activating factor receptor.
      
 0.711
CHEK2
Checkpoint kinase 2.
      
 0.673
ADGRL4
Adhesion G protein-coupled receptor L4.
      
 0.599
PIK3R5
Phosphoinositide-3-kinase regulatory subunit 5.
      
 0.597
EBPL
EBP like.
      
 0.579
ENSSARP00000008712
annotation not available
      
 0.575
SSH2
Slingshot protein phosphatase 2.
      
 0.572
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.