Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA4Pleckstrin homology domain containing A4. (748 aa)    
Predicted Functional Partners:
DMXL1
Dmx like 1.
    
 
 0.697
ENSSARP00000007835
annotation not available
    
 
 0.686
ENSSARP00000008486
annotation not available
      
 0.656
ENSSARP00000004100
annotation not available
    
  0.655
FAU
FAU ubiquitin like and ribosomal protein S30 fusion.
    
 0.636
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.635
PRKAA1
Protein kinase AMP-activated catalytic subunit alpha 1.
    
 
 0.633
DDX39B
DExD-box helicase 39B.
    
   0.628
LATS2
Large tumor suppressor kinase 2.
    
 0.627
LATS1
Large tumor suppressor kinase 1.
    
 0.627
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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