STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000002178annotation not available (243 aa)    
Predicted Functional Partners:
ENSSARP00000011141
annotation not available
    
 0.995
RAD1
RAD1 checkpoint DNA exonuclease.
    
 0.988
TOPBP1
DNA topoisomerase II binding protein 1.
    
 0.985
RAD17
RAD17 checkpoint clamp loader component.
   
 0.979
RFC4
Replication factor C subunit 4.
   
 0.976
RFC3
Replication factor C subunit 3.
   
 0.972
WRN
WRN RecQ like helicase.
   
 0.968
SLF1
SMC5-SMC6 complex localization factor 1.
    
 0.957
ATR
ATR serine/threonine kinase.
    
 0.925
RPA1
Replication protein A1.
   
 0.908
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.