STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRRG1Proline rich and Gla domain 1. (218 aa)    
Predicted Functional Partners:
ABHD4
Abhydrolase domain containing 4.
      
 0.691
ENSSARP00000000260
annotation not available
      
 0.677
RFFL
Ring finger and FYVE like domain containing E3 ubiquitin protein ligase.
      
 0.675
SLC44A1
Solute carrier family 44 member 1.
      
 0.637
DYNLT3
Dynein light chain Tctex-type 3.
      
 0.551
RALGPS2
Ral GEF with PH domain and SH3 binding motif 2.
      
 0.543
LNX1
Ligand of numb-protein X 1.
      
 0.538
ENSSARP00000001429
annotation not available
      
 0.537
ENSSARP00000013088
annotation not available
      
 0.537
SYTL5
Synaptotagmin like 5.
      
 0.536
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.