Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CADPS2Calcium dependent secretion activator 2. (1290 aa)    
Predicted Functional Partners:
COQ6
Coenzyme Q6, monooxygenase.
      
 0.597
KCTD1
Potassium channel tetramerization domain containing 1.
      
 0.597
ENSSARP00000007003
annotation not available
      
 0.588
CHD8
Chromodomain helicase DNA binding protein 8.
      
 0.566
YIPF6
Yip1 domain family member 6.
      
 0.558
ENSSARP00000012321
annotation not available
   
  
 0.556
ENSSARP00000010347
annotation not available
     
  0.553
ENSSARP00000012517
annotation not available
     
  0.553
PCSK2
Proprotein convertase subtilisin/kexin type 2.
   
  
 0.532
ENSSARP00000000628
annotation not available
    
 
 0.528
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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