Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
WACWW domain containing adaptor with coiled-coil. (621 aa)    
Predicted Functional Partners:
RNF40
Ring finger protein 40.
   
 0.987
RNF20
Ring finger protein 20.
   
 0.987
RBM25
RNA binding motif protein 25.
   
 0.937
SNRNP35
Small nuclear ribonucleoprotein U11/U12 subunit 35.
    
 0.922
ENSSARP00000003402
annotation not available
   
 0.878
SF3B3
Splicing factor 3b subunit 3.
    
 0.876
DDX46
DEAD-box helicase 46.
   
 0.848
ENSSARP00000009876
annotation not available
    
 0.842
PRPF39
pre-mRNA processing factor 39.
    
 0.841
RBM12B
RNA binding motif protein 12B.
    
   0.834
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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