STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000002264annotation not available (275 aa)    
Predicted Functional Partners:
ENSSARP00000007617
annotation not available
   
 
 0.966
ENSSARP00000006181
annotation not available
    
 0.936
ENSSARP00000005378
annotation not available
    
 0.917
UBE2J1
Ubiquitin conjugating enzyme E2 J1.
    
 0.906
MARCHF6
Membrane associated ring-CH-type finger 6.
    
 
 0.902
ENSSARP00000007131
annotation not available
    
 0.901
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.879
UBA5
Ubiquitin like modifier activating enzyme 5.
    
 0.875
UBE2H
Ubiquitin conjugating enzyme E2 H.
     
 0.860
ENSSARP00000002492
annotation not available
    
 0.849
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.