STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NUP133Nucleoporin 133. (1146 aa)    
Predicted Functional Partners:
NUP107
Nucleoporin 107.
   
 0.999
RANBP2
RAN binding protein 2.
   
 0.999
NUP85
Nucleoporin 85.
   
 0.999
SEH1L
SEH1 like nucleoporin.
   
 0.998
NUP37
Nucleoporin 37.
   
 0.998
NUP43
Nucleoporin 43.
   
 0.998
NUP98
Nucleoporin 98.
   
 0.997
NUP160
Nucleoporin 160.
   
 0.994
NUP155
Nucleoporin 155.
   
 0.993
ENSSARP00000012898
annotation not available
   
 0.993
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.