STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBNO1Strawberry notch homolog 1. (1391 aa)    
Predicted Functional Partners:
ENSSARP00000006518
annotation not available
   
  
 0.885
LTN1
Listerin E3 ubiquitin protein ligase 1.
   
    0.882
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
   
    0.837
PDS5A
PDS5 cohesin associated factor A.
   
    0.748
WAPL
WAPL cohesin release factor.
   
    0.732
IREB2
Iron responsive element binding protein 2.
   
    0.638
OLA1
Obg like ATPase 1.
      
 0.636
ANKRD17
Ankyrin repeat domain 17.
   
   0.630
ENSSARP00000006652
annotation not available
   
   0.630
USP26
Ubiquitin specific peptidase 26.
   
  
 0.626
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.