STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB5ARAB5A, member RAS oncogene family. (160 aa)    
Predicted Functional Partners:
ENSSARP00000001701
annotation not available
   
 0.992
RBSN
Rabenosyn, RAB effector.
   
 0.934
APPL1
Adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1.
    
 
 0.932
ENSSARP00000012194
annotation not available
    
 
 0.932
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.922
GDI2
GDP dissociation inhibitor 2.
   
 0.912
RABEP1
Rabaptin, RAB GTPase binding effector protein 1.
    
 0.902
ENSSARP00000003538
annotation not available
   
 0.901
GAPVD1
GTPase activating protein and VPS9 domains 1.
    
 0.871
ALS2
Alsin Rho guanine nucleotide exchange factor ALS2.
    
 0.845
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.