STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000002805annotation not available (240 aa)    
Predicted Functional Partners:
BANF1
Barrier to autointegration factor 1.
   
 0.897
BANF2
Barrier to autointegration factor 2.
   
 0.795
LEMD3
LEM domain containing 3.
    
 0.793
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.760
ENSSARP00000012970
annotation not available
    
 0.744
ACTL7A
Actin like 7A.
    
 0.716
LRRC18
Leucine rich repeat containing 18.
    
 
 0.687
RBM23
RNA binding motif protein 23.
    
 0.668
RBM39
RNA binding motif protein 39.
    
 0.668
WDR48
WD repeat domain 48.
      
 0.666
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.