STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SERPINF1Serpin family F member 1. (390 aa)    
Predicted Functional Partners:
LRP6
LDL receptor related protein 6.
    
 0.889
ENSSARP00000005350
annotation not available
  
 0.759
VTN
Vitronectin.
   
 0.728
ENSSARP00000001729
annotation not available
  
 
 
 0.656
ENSSARP00000005620
annotation not available
  
 
 
 0.656
ENSSARP00000008190
annotation not available
    
 0.650
F9
Coagulation factor IX.
  
 0.611
CRTAP
Cartilage associated protein.
     
 0.597
ENSSARP00000003001
annotation not available
  
 0.595
FIGN
Fidgetin, microtubule severing factor.
    
 0.588
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.