STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DCUN1D5Defective in cullin neddylation 1 domain containing 5. (207 aa)    
Predicted Functional Partners:
UBE2M
Ubiquitin conjugating enzyme E2 M.
    
 0.938
CUL3
Cullin 3.
   
 0.929
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.904
RBX1
Ring-box 1.
   
 0.904
UBA3
Ubiquitin like modifier activating enzyme 3.
   
 0.899
UBXN7
UBX domain protein 7.
     
 0.873
CUL2
Cullin 2.
   
 0.841
CAND1
Cullin associated and neddylation dissociated 1.
    
 0.832
COPS3
COP9 signalosome subunit 3.
    
 0.791
CUL4B
Cullin 4B.
    
 0.789
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.