STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGLN3Egl-9 family hypoxia inducible factor 3. (239 aa)    
Predicted Functional Partners:
HIF1A
Hypoxia inducible factor 1 subunit alpha.
    
 0.996
ENSSARP00000007550
annotation not available
    
 0.990
NPAS3
Neuronal PAS domain protein 3.
    
 0.937
NPAS1
Neuronal PAS domain protein 1.
    
 0.937
ENSSARP00000003278
annotation not available
    
 0.875
ENSSARP00000011332
annotation not available
    
 0.866
CUL2
Cullin 2.
     
 0.864
RBX1
Ring-box 1.
     
 0.741
ENSSARP00000013057
annotation not available
    
 0.736
ENSSARP00000005386
annotation not available
     
 0.727
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.