STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000003012annotation not available (1085 aa)    
Predicted Functional Partners:
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 
 0.999
DDB2
Damage specific DNA binding protein 2.
    
 0.998
ENSSARP00000006379
annotation not available
    
 0.992
RBX1
Ring-box 1.
    
 0.992
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.991
DCAF1
DDB1 and CUL4 associated factor 1.
    
 0.991
ENSSARP00000003960
annotation not available
    
 0.990
DCAF12
DDB1 and CUL4 associated factor 12.
    
 0.987
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.987
ENSSARP00000007595
annotation not available
    
 0.986
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.