Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000003012annotation not available (1085 aa)    
Predicted Functional Partners:
DDB2
Damage specific DNA binding protein 2.
    
 0.983
ENSSARP00000003960
annotation not available
    
 0.983
ENSSARP00000006379
annotation not available
    
 0.983
DCAF11
DDB1 and CUL4 associated factor 11.
    
 0.983
RBX1
Ring-box 1.
    
 0.983
DCAF1
DDB1 and CUL4 associated factor 1.
   
 0.983
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.980
DCAF12
DDB1 and CUL4 associated factor 12.
    
 0.977
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.977
DCAF7
DDB1 and CUL4 associated factor 7.
    
 0.976
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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