Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM25Transmembrane protein 25. (235 aa)    
Predicted Functional Partners:
ANKRD13B
Ankyrin repeat domain 13B.
      
 0.764
ENSSARP00000012693
annotation not available
      
 0.655
SEZ6L2
Seizure related 6 homolog like 2.
    
 
 0.621
PLPPR4
Phospholipid phosphatase related 4.
      
 0.619
TMEM14A
Transmembrane protein 14A.
      
 0.617
TMEM139
Transmembrane protein 139.
      
 0.612
ENSSARP00000011823
annotation not available
    
   0.602
ENSSARP00000001712
annotation not available
      
 0.574
TMEM39A
Transmembrane protein 39A.
      
 0.574
TMEM88
Transmembrane protein 88.
      
 0.571
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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