STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GBP1Guanylate binding protein 1. (591 aa)    
Predicted Functional Partners:
ENSSARP00000009978
annotation not available
  
 
 
0.843
GBP6
Guanylate binding protein family member 6.
  
 
 
0.834
MARCHF8
Membrane associated ring-CH-type finger 8.
      
 0.538
UEVLD
UEV and lactate/malate dehyrogenase domains.
     
 0.505
TMEM150A
Transmembrane protein 150A.
   
  
 0.494
ENSSARP00000010522
annotation not available
    
 
 0.454
RPS6KA6
Ribosomal protein S6 kinase A6.
   
 
 0.431
TXNIP
Thioredoxin interacting protein.
    
 
 0.426
ENSSARP00000005635
annotation not available
   
 
 0.419
CXCL10
C-X-C motif chemokine ligand 10.
   
  
 0.414
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.