Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SNX19Sorting nexin 19. (924 aa)    
Predicted Functional Partners:
ENSSARP00000007861
annotation not available
     
 0.800
PPT2
Palmitoyl-protein thioesterase 2.
      
 0.719
BBS9
Bardet-Biedl syndrome 9.
      
 0.659
INSL6
Insulin like 6.
      
 0.657
MAP3K12
Mitogen-activated protein kinase kinase kinase 12.
      
 0.630
STARD3NL
STARD3 N-terminal like.
      
 0.620
SNX7
Sorting nexin 7.
      
 0.619
ADCY9
Adenylate cyclase 9.
      
 0.618
SNX8
Sorting nexin 8.
      
 0.615
ENSSARP00000013070
annotation not available
    
 
 0.607
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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