STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KPNA1Karyopherin subunit alpha 1. (538 aa)    
Predicted Functional Partners:
KPNB1
Karyopherin subunit beta 1.
   
 0.997
STAT1
Signal transducer and activator of transcription 1.
    
 0.972
CSE1L
Chromosome segregation 1 like.
   
 0.970
KPNA4
Karyopherin subunit alpha 4.
  
0.962
KPNA3
Karyopherin subunit alpha 3.
  
0.948
ENSSARP00000003637
annotation not available
   
 0.910
RELA
RELA proto-oncogene, NF-kB subunit.
    
 0.903
KPNA6
Karyopherin subunit alpha 6.
  
 
0.902
KPNA7
Karyopherin subunit alpha 7.
  
 
0.871
XPO5
Exportin 5.
   
 0.863
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.