Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000003258annotation not available (450 aa)    
Predicted Functional Partners:
RBSN
Rabenosyn, RAB effector.
    
 0.953
SNAP29
Synaptosome associated protein 29.
    
 
 0.857
ENSSARP00000011942
annotation not available
    
 
 0.782
ENSSARP00000001627
annotation not available
    
 
 0.698
ENSSARP00000011755
annotation not available
   
   0.655
NUDCD1
NudC domain containing 1.
    
   0.629
ENSSARP00000005374
annotation not available
    
   0.629
VPS45
Vacuolar protein sorting 45 homolog.
     
 0.626
PACSIN2
Protein kinase C and casein kinase substrate in neurons 2.
   
 
 0.600
RAB5B
RAB5B, member RAS oncogene family.
     
 0.597
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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