Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000003259annotation not available (1488 aa)    
Predicted Functional Partners:
CHRAC1
Chromatin accessibility complex subunit 1.
    
 0.962
SMARCA1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1.
   
 0.949
ENSSARP00000005018
annotation not available
   
 0.949
BPTF
Bromodomain PHD finger transcription factor.
   
 
 0.937
RSF1
Remodeling and spacing factor 1.
   
 0.936
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
     
  0.920
CECR2
CECR2 histone acetyl-lysine reader.
    
 0.918
ENSSARP00000012708
annotation not available
     
 0.917
DEK
DEK proto-oncogene.
   
 0.854
HMGXB4
HMG-box containing 4.
     
  0.852
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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