STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC101542512Lithostathine-like. (170 aa)    
Predicted Functional Partners:
TNC
Tenascin C.
    
  0.617
ENSSARP00000004451
annotation not available
    
  0.548
ENSSARP00000008674
annotation not available
    
  0.548
ADGRL3
Adhesion G protein-coupled receptor L3.
    
  0.548
ENSSARP00000007824
annotation not available
    
  0.528
HABP2
Hyaluronan binding protein 2.
    
  0.528
HAPLN1
Hyaluronan and proteoglycan link protein 1.
    
  0.516
ENSSARP00000006475
annotation not available
    
  0.449
ENSSARP00000008797
annotation not available
    
  0.445
ENSSARP00000008342
annotation not available
    
  0.410
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.