STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC46A3Solute carrier family 46 member 3. (391 aa)    
Predicted Functional Partners:
ENSSARP00000001848
annotation not available
      
 0.554
ENSSARP00000008993
annotation not available
      
 0.526
NFX1
Nuclear transcription factor, X-box binding 1.
      
 0.493
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
      
 0.483
SLC16A3
Solute carrier family 16 member 3.
      
 0.459
LOC101545650
Complement C1q and tumor necrosis factor-related protein 9-like.
    
   0.457
GMFB
Glia maturation factor beta.
      
 0.450
ENSSARP00000012669
annotation not available
      
 0.450
HLA-DMA
Major histocompatibility complex, class II, DM alpha.
      
 0.449
SLC39A1
Solute carrier family 39 member 1.
      
 0.444
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.