Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DDX41DEAD-box helicase 41. (616 aa)    
Predicted Functional Partners:
ENSSARP00000004652
annotation not available
    
 0.979
PPIL1
Peptidylprolyl isomerase like 1.
    
 0.976
ENSSARP00000006636
annotation not available
   
 0.974
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.974
ENSSARP00000008335
annotation not available
    
 0.972
FAM32A
Family with sequence similarity 32 member A.
    
 0.972
ENSSARP00000002214
annotation not available
    
  0.965
ENSSARP00000012285
annotation not available
    
  0.949
PPWD1
Peptidylprolyl isomerase domain and WD repeat containing 1.
   
 0.948
NKAPL
NFKB activating protein like.
    
  0.946
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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