Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC25A38Solute carrier family 25 member 38. (304 aa)    
Predicted Functional Partners:
CLPX
Caseinolytic mitochondrial matrix peptidase chaperone subunit.
    
 
 0.819
GLRX5
Glutaredoxin 5.
      
 0.743
ENSSARP00000012635
annotation not available
      
 0.658
ABCB7
ATP binding cassette subfamily B member 7.
      
 0.657
ENSSARP00000012841
annotation not available
    
 
 0.637
COG3
Component of oligomeric golgi complex 3.
     
  0.632
FECH
Ferrochelatase.
      
 0.618
ALAS2
5'-aminolevulinate synthase 2.
      
 0.605
CPOX
Coproporphyrinogen oxidase.
      
 0.591
UROD
Uroporphyrinogen decarboxylase.
      
 0.587
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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