Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PUS10Pseudouridine synthase 10. (490 aa)    
Predicted Functional Partners:
ABITRAM
Actin binding transcription modulator.
    
   0.944
TRMT5
tRNA methyltransferase 5.
   
  
 0.734
PUS7L
Pseudouridine synthase 7 like.
   
  
 0.699
PUS7
Pseudouridine synthase 7.
   
  
 0.696
PUS1
Pseudouridine synthase 1.
   
  
 0.663
ENSSARP00000010091
annotation not available
      
 0.652
DKC1
Dyskerin pseudouridine synthase 1.
   
  
 0.650
PUS3
Pseudouridine synthase 3.
   
  
 0.646
ENSSARP00000005170
annotation not available
   
  
 0.625
ENSSARP00000007484
annotation not available
   
  
 0.612
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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