STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS10Pseudouridine synthase 10. (490 aa)    
Predicted Functional Partners:
ABITRAM
Actin binding transcription modulator.
    
   0.895
ENSSARP00000011345
annotation not available
      
 0.708
PUS7L
Pseudouridine synthase 7 like.
   
  
 0.703
PUS1
Pseudouridine synthase 1.
   
  
 0.684
PUS3
Pseudouridine synthase 3.
   
  
 0.681
PTPN2
Protein tyrosine phosphatase non-receptor type 2.
      
 0.679
TAGAP
T cell activation RhoGTPase activating protein.
      
 0.662
PUS7
Pseudouridine synthase 7.
   
  
 0.595
TRMT5
tRNA methyltransferase 5.
   
  
 0.567
THUMPD3
THUMP domain containing 3.
      
 0.565
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.