Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000003340annotation not available (209 aa)    
Predicted Functional Partners:
ENSSARP00000003354
annotation not available
  
 
 0.966
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.950
POLR2B
RNA polymerase II subunit B.
   
 0.922
SUPT16H
SPT16 homolog, facilitates chromatin remodeling subunit.
   
 0.912
ENSSARP00000001412
annotation not available
    
 0.908
SSRP1
Structure specific recognition protein 1.
   
 0.907
POLR2D
RNA polymerase II subunit D.
    
 0.907
ENSSARP00000007933
annotation not available
    
 0.906
ENSSARP00000010342
annotation not available
    
 0.902
POLR2I
RNA polymerase II subunit I.
    
 0.898
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.