Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSSARP00000003341annotation not available (306 aa)    
Predicted Functional Partners:
ENSSARP00000007231
annotation not available
   
 0.992
HNRNPR
Heterogeneous nuclear ribonucleoprotein R.
   
 0.986
ENSSARP00000002530
annotation not available
   
 0.979
SYNCRIP
Synaptotagmin binding cytoplasmic RNA interacting protein.
   
 0.967
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 0.961
HNRNPDL
Heterogeneous nuclear ribonucleoprotein D like.
   
 0.955
ENSSARP00000008153
annotation not available
   
 0.949
ENSSARP00000002898
annotation not available
   
 0.947
DHX9
DExH-box helicase 9.
   
 0.936
ILF3
Interleukin enhancer binding factor 3.
   
 
 0.936
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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