Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TRIP4Thyroid hormone receptor interactor 4. (581 aa)    
Predicted Functional Partners:
ASCC3
Activating signal cointegrator 1 complex subunit 3.
   
 0.998
ASCC2
Activating signal cointegrator 1 complex subunit 2.
   
 0.998
ASCC1
Activating signal cointegrator 1 complex subunit 1.
   
 
 0.979
ENSSARP00000008176
annotation not available
   
 0.976
MED4
Mediator complex subunit 4.
    
 
 0.955
ENSSARP00000008673
annotation not available
   
 0.952
MED1
Mediator complex subunit 1.
    
 
 0.945
MED23
Mediator complex subunit 23.
    
   0.944
MED15
Mediator complex subunit 15.
    
   0.944
MED28
Mediator complex subunit 28.
    
   0.944
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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