Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
USP15Ubiquitin specific peptidase 15. (981 aa)    
Predicted Functional Partners:
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.971
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.971
USP14
Ubiquitin specific peptidase 14.
    
 
 0.970
SMAD7
SMAD family member 7.
    
 0.956
SMAD4
SMAD family member 4.
    
 0.956
SMAD2
SMAD family member 2.
    
 0.951
USP4
Ubiquitin specific peptidase 4.
   
   0.946
TRAF6
TNF receptor associated factor 6.
    
 0.938
PSMD14
Proteasome 26S subunit, non-ATPase 14.
    
 
 0.930
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.918
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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