STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP15Ubiquitin specific peptidase 15. (981 aa)    
Predicted Functional Partners:
SART3
Spliceosome associated factor 3, U4/U6 recycling protein.
    
 
 0.973
SMAD7
SMAD family member 7.
    
 0.865
SMURF2
SMAD specific E3 ubiquitin protein ligase 2.
    
 0.855
TGFBR1
Transforming growth factor beta receptor 1.
    
 0.840
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.826
USP4
Ubiquitin specific peptidase 4.
  
 
 
0.813
TRAF6
TNF receptor associated factor 6.
    
 0.800
SMAD2
SMAD family member 2.
    
 0.773
ITCH
Itchy E3 ubiquitin protein ligase.
   
 0.765
SMAD1
SMAD family member 1.
    
 0.762
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.