STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMEM41BTransmembrane protein 41B. (290 aa)    
Predicted Functional Partners:
ENSSARP00000004929
annotation not available
  
 
  0.741
ENSSARP00000006437
annotation not available
      
 0.739
ENSSARP00000004028
annotation not available
   
 
  0.735
RUSC2
RUN and SH3 domain containing 2.
     
 0.721
VMP1
Vacuole membrane protein 1.
    
 0.717
PDHB
Pyruvate dehydrogenase E1 beta subunit.
     
 0.698
BCKDHB
Branched chain keto acid dehydrogenase E1 subunit beta.
     
 0.689
PISD
Phosphatidylserine decarboxylase.
    
  0.686
ENSSARP00000000980
annotation not available
    
 0.680
ENSSARP00000003512
annotation not available
      
 0.673
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.