STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMO1LIM domain only 1. (112 aa)    
Predicted Functional Partners:
ENSSARP00000011344
annotation not available
    
 0.925
LDB2
LIM domain binding 2.
    
 0.909
TAL2
TAL bHLH transcription factor 2.
    
 0.730
TCF4
Transcription factor 4.
    
 0.697
TCF12
Transcription factor 12.
    
 0.697
CBFB
Core-binding factor subunit beta.
    
  0.666
TRPS1
Transcriptional repressor GATA binding 1.
    
 0.610
SRF
Serum response factor.
    
 0.607
LHX9
LIM homeobox 9.
   
 
0.603
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.595
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.