Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMO1LIM domain only 1. (112 aa)    
Predicted Functional Partners:
ENSSARP00000011344
annotation not available
    
 0.942
LDB2
LIM domain binding 2.
    
 0.930
LHX9
LIM homeobox 9.
   
 
 0.873
SSBP2
Single stranded DNA binding protein 2.
    
 
 0.844
ENSSARP00000006823
annotation not available
    
  0.790
CBFB
Core-binding factor subunit beta.
    
 0.642
ARID4A
AT-rich interaction domain 4A.
    
 0.632
ARID4B
AT-rich interaction domain 4B.
    
 0.632
LMO4
LIM domain only 4.
    
   0.630
TAL2
TAL bHLH transcription factor 2.
    
 0.629
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.