STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MRPL48Mitochondrial ribosomal protein L48. (254 aa)    
Predicted Functional Partners:
MRPL40
Mitochondrial ribosomal protein L40.
   
 
 0.999
ENSSARP00000007483
annotation not available
   
   0.999
ENSSARP00000001296
annotation not available
   
 
 0.982
MRPL13
Mitochondrial ribosomal protein L13.
   
 
 0.982
MRPS22
Mitochondrial ribosomal protein S22.
   
 
 0.981
MRPS33
Mitochondrial ribosomal protein S33.
   
   0.968
MRPS15
Mitochondrial ribosomal protein S15.
   
 
 0.963
MRPL49
Mitochondrial ribosomal protein L49.
    
 
 0.960
DAP3
Death associated protein 3.
   
 
 0.959
ENSSARP00000000780
annotation not available
   
 
 0.954
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.