Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LACTBLactamase beta. (551 aa)    
Predicted Functional Partners:
UTP4
UTP4 small subunit processome component.
    
 0.634
CASK
Calcium/calmodulin dependent serine protein kinase.
    
 0.571
WDR43
WD repeat domain 43.
    
 0.566
HEATR1
HEAT repeat containing 1.
    
  0.553
ENSSARP00000001861
annotation not available
    
 0.531
NRXN3
Neurexin 3.
    
 0.531
ENSSARP00000011248
annotation not available
    
 0.531
DLG2
Discs large MAGUK scaffold protein 2.
    
  0.480
ENSSARP00000002714
annotation not available
    
  0.480
DLG3
Discs large MAGUK scaffold protein 3.
    
  0.480
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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