STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYNE1Spectrin repeat containing nuclear envelope protein 1. (8773 aa)    
Predicted Functional Partners:
ENSSARP00000004047
annotation not available
    
 0.999
SUN3
Sad1 and UNC84 domain containing 3.
    
 0.981
ENSSARP00000012970
annotation not available
    
 0.964
CCDC155
Coiled-coil domain containing 155.
    
 0.954
LMNB1
Lamin B1.
    
 0.904
SYNE2
Spectrin repeat containing nuclear envelope protein 2.
     
0.904
ENSSARP00000008340
annotation not available
     
 0.893
LMNA
Lamin A/C.
    
 0.874
SPAG4
Sperm associated antigen 4.
    
 0.730
NCOR1
Nuclear receptor corepressor 1.
    
 0.721
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.