Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PFDN1Prefoldin subunit 1. (111 aa)    
Predicted Functional Partners:
ENSSARP00000003967
annotation not available
   
 0.999
PFDN5
Prefoldin subunit 5.
   
 0.999
ENSSARP00000005727
annotation not available
   
 0.999
CCT3
Chaperonin containing TCP1 subunit 3.
   
 0.947
UXT
Ubiquitously expressed prefoldin like chaperone.
     
 0.930
TCP1
T-complex 1.
   
 0.917
ENSSARP00000002031
annotation not available
   
 0.878
CCT7
Chaperonin containing TCP1 subunit 7.
   
  0.866
URI1
URI1 prefoldin like chaperone.
     
 0.851
PDCD5
Programmed cell death 5.
   
    0.845
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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