STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPATCH1G-patch domain containing 1. (927 aa)    
Predicted Functional Partners:
SYF2
SYF2 pre-mRNA splicing factor.
    
  0.975
ENSSARP00000004242
annotation not available
    
 0.969
YJU2
YJU2 splicing factor homolog.
    
  0.964
ENSSARP00000004652
annotation not available
    
  0.947
PPIL1
Peptidylprolyl isomerase like 1.
   
  0.943
MTREX
Mtr4 exosome RNA helicase.
   
 0.943
DHX35
DEAH-box helicase 35.
    
 0.938
SRRM1
Serine and arginine repetitive matrix 1.
     
 0.938
PPIL2
Peptidylprolyl isomerase like 2.
   
  0.937
PPIL4
Peptidylprolyl isomerase like 4.
   
  0.936
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.