STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT4Keratin 4. (448 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.840
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.820
ENSSARP00000002827
annotation not available
    
  0.795
ENSSARP00000009665
annotation not available
    
  0.795
RANBP2
RAN binding protein 2.
    
 0.722
ENSSARP00000001172
annotation not available
      
 0.687
COPS3
COP9 signalosome subunit 3.
    
 0.686
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.681
KDM6A
Lysine demethylase 6A.
    
 0.675
KDM6B
Lysine demethylase 6B.
    
 0.675
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.