ENSSARP00000003908 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000003908

annotation not available (249 aa)

Predicted Functional Partners:

THSD7B

0.620

SYT6

0.617

S100A11

0.598

NLGN3

0.567

ENSSARP00000003394

0.567

ENSSARP00000001315

0.520

ENSSARP00000005184

0.520

ENSSARP00000008465

0.520

ENSSARP00000011762

0.520

FAM149A

0.520

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000001315	ENSSARP00000003908	ENSSARP00000001315	ENSSARP00000003908	annotation not available	annotation not available	0.520
ENSSARP00000001315	ENSSARP00000005184	ENSSARP00000001315	ENSSARP00000005184	annotation not available	annotation not available	0.991
ENSSARP00000003394	ENSSARP00000003908	ENSSARP00000003394	ENSSARP00000003908	annotation not available	annotation not available	0.567
ENSSARP00000003394	SYT6	ENSSARP00000003394	ENSSARP00000006978	annotation not available	Synaptotagmin 6.	0.643
ENSSARP00000003908	ENSSARP00000001315	ENSSARP00000003908	ENSSARP00000001315	annotation not available	annotation not available	0.520
ENSSARP00000003908	ENSSARP00000003394	ENSSARP00000003908	ENSSARP00000003394	annotation not available	annotation not available	0.567
ENSSARP00000003908	ENSSARP00000005184	ENSSARP00000003908	ENSSARP00000005184	annotation not available	annotation not available	0.520
ENSSARP00000003908	ENSSARP00000008465	ENSSARP00000003908	ENSSARP00000008465	annotation not available	annotation not available	0.520
ENSSARP00000003908	ENSSARP00000011762	ENSSARP00000003908	ENSSARP00000011762	annotation not available	annotation not available	0.520
ENSSARP00000003908	FAM149A	ENSSARP00000003908	ENSSARP00000011827	annotation not available	Family with sequence similarity 149 member A.	0.520
ENSSARP00000003908	NLGN3	ENSSARP00000003908	ENSSARP00000002392	annotation not available	Neuroligin 3.	0.567
ENSSARP00000003908	S100A11	ENSSARP00000003908	ENSSARP00000005791	annotation not available	S100 calcium binding protein A11.	0.598
ENSSARP00000003908	SYT6	ENSSARP00000003908	ENSSARP00000006978	annotation not available	Synaptotagmin 6.	0.617
ENSSARP00000003908	THSD7B	ENSSARP00000003908	ENSSARP00000007650	annotation not available	Thrombospondin type 1 domain containing 7B.	0.620
ENSSARP00000005184	ENSSARP00000001315	ENSSARP00000005184	ENSSARP00000001315	annotation not available	annotation not available	0.991
ENSSARP00000005184	ENSSARP00000003908	ENSSARP00000005184	ENSSARP00000003908	annotation not available	annotation not available	0.520
ENSSARP00000005184	ENSSARP00000008465	ENSSARP00000005184	ENSSARP00000008465	annotation not available	annotation not available	0.992
ENSSARP00000008465	ENSSARP00000003908	ENSSARP00000008465	ENSSARP00000003908	annotation not available	annotation not available	0.520
ENSSARP00000008465	ENSSARP00000005184	ENSSARP00000008465	ENSSARP00000005184	annotation not available	annotation not available	0.992
ENSSARP00000011762	ENSSARP00000003908	ENSSARP00000011762	ENSSARP00000003908	annotation not available	annotation not available	0.520