STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCA1ATP binding cassette subfamily A member 1. (2259 aa)    
Predicted Functional Partners:
ENSSARP00000004949
annotation not available
    
 0.977
NR1H3
Nuclear receptor subfamily 1 group H member 3.
    
 0.882
ENSSARP00000012515
annotation not available
   
 0.828
APOE
Apolipoprotein E.
      
 0.761
ENSSARP00000004257
annotation not available
    
 0.743
FGA
Fibrinogen alpha chain.
    
 
 0.742
ENSSARP00000009130
annotation not available
     
 0.742
PPARG
Peroxisome proliferator activated receptor gamma.
    
 0.724
SPTLC1
Serine palmitoyltransferase long chain base subunit 1.
    
 
 0.675
ABCC11
ATP binding cassette subfamily C member 11.
   
0.674
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.