STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRAPPC3LTrafficking protein particle complex 3 like. (134 aa)    
Predicted Functional Partners:
TRAPPC4
Trafficking protein particle complex 4.
   
 0.996
TRAPPC6B
Trafficking protein particle complex 6B.
   
 0.996
ENSSARP00000009554
annotation not available
    
 0.996
TRAPPC1
Trafficking protein particle complex 1.
   
 0.995
TRAPPC8
Trafficking protein particle complex 8.
    
 0.994
TRAPPC2B
Trafficking protein particle complex 2.
    
 0.994
TRAPPC11
Trafficking protein particle complex 11.
    
 0.990
TRAPPC12
Trafficking protein particle complex 12.
    
 0.981
RAB1A
RAB1A, member RAS oncogene family.
   
 0.976
TRAPPC13
Trafficking protein particle complex 13.
    
 0.957
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.