ENSSARP00000004045 protein (Sorex araneus) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000004045

annotation not available (399 aa)

Predicted Functional Partners:

ENSSARP00000000392

0.786

ENSSARP00000002827

0.665

ENSSARP00000009665

0.665

NEK9

0.639

RANBP2

0.624

IFT140

0.614

ENSSARP00000004171

0.606

ENSSARP00000000889

0.599

ENSSARP00000003538

0.582

ENSSARP00000013012

0.581

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000000392	ENSSARP00000000889	ENSSARP00000000392	ENSSARP00000000889	annotation not available	annotation not available	0.672
ENSSARP00000000392	ENSSARP00000002827	ENSSARP00000000392	ENSSARP00000002827	annotation not available	annotation not available	0.665
ENSSARP00000000392	ENSSARP00000003538	ENSSARP00000000392	ENSSARP00000003538	annotation not available	annotation not available	0.582
ENSSARP00000000392	ENSSARP00000004045	ENSSARP00000000392	ENSSARP00000004045	annotation not available	annotation not available	0.786
ENSSARP00000000392	ENSSARP00000009665	ENSSARP00000000392	ENSSARP00000009665	annotation not available	annotation not available	0.665
ENSSARP00000000392	IFT140	ENSSARP00000000392	ENSSARP00000006906	annotation not available	Intraflagellar transport 140.	0.710
ENSSARP00000000392	NEK9	ENSSARP00000000392	ENSSARP00000009884	annotation not available	NIMA related kinase 9.	0.867
ENSSARP00000000392	RANBP2	ENSSARP00000000392	ENSSARP00000005110	annotation not available	RAN binding protein 2.	0.668
ENSSARP00000000889	ENSSARP00000000392	ENSSARP00000000889	ENSSARP00000000392	annotation not available	annotation not available	0.672
ENSSARP00000000889	ENSSARP00000004045	ENSSARP00000000889	ENSSARP00000004045	annotation not available	annotation not available	0.599
ENSSARP00000000889	NEK9	ENSSARP00000000889	ENSSARP00000009884	annotation not available	NIMA related kinase 9.	0.508
ENSSARP00000000889	RANBP2	ENSSARP00000000889	ENSSARP00000005110	annotation not available	RAN binding protein 2.	0.936
ENSSARP00000002827	ENSSARP00000000392	ENSSARP00000002827	ENSSARP00000000392	annotation not available	annotation not available	0.665
ENSSARP00000002827	ENSSARP00000004045	ENSSARP00000002827	ENSSARP00000004045	annotation not available	annotation not available	0.665
ENSSARP00000002827	ENSSARP00000009665	ENSSARP00000002827	ENSSARP00000009665	annotation not available	annotation not available	0.986
ENSSARP00000002827	RANBP2	ENSSARP00000002827	ENSSARP00000005110	annotation not available	RAN binding protein 2.	0.475
ENSSARP00000003538	ENSSARP00000000392	ENSSARP00000003538	ENSSARP00000000392	annotation not available	annotation not available	0.582
ENSSARP00000003538	ENSSARP00000004045	ENSSARP00000003538	ENSSARP00000004045	annotation not available	annotation not available	0.582
ENSSARP00000003538	NEK9	ENSSARP00000003538	ENSSARP00000009884	annotation not available	NIMA related kinase 9.	0.521
ENSSARP00000003538	RANBP2	ENSSARP00000003538	ENSSARP00000005110	annotation not available	RAN binding protein 2.	0.759