ENSSARP00000004064 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

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Co-occurrence

Co-expression

Experiments

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[Homology]

Score

ENSSARP00000004064

annotation not available (410 aa)

Predicted Functional Partners:

MRPS7

0.999

ENSSARP00000002764

0.999

MRPS12

0.999

ENSSARP00000009489

0.999

MRPS9

0.999

FAU

0.999

MRPS15

0.999

DAP3

0.999

MRPS22

0.998

MRPS27

0.998

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DAP3	ENSSARP00000002764	ENSSARP00000011259	ENSSARP00000002764	Death associated protein 3.	annotation not available	0.998
DAP3	ENSSARP00000004064	ENSSARP00000011259	ENSSARP00000004064	Death associated protein 3.	annotation not available	0.999
DAP3	ENSSARP00000009489	ENSSARP00000011259	ENSSARP00000009489	Death associated protein 3.	annotation not available	0.994
DAP3	MRPS12	ENSSARP00000011259	ENSSARP00000006321	Death associated protein 3.	28S ribosomal protein S12, mitochondrial.	0.997
DAP3	MRPS15	ENSSARP00000011259	ENSSARP00000010891	Death associated protein 3.	Mitochondrial ribosomal protein S15.	0.997
DAP3	MRPS22	ENSSARP00000011259	ENSSARP00000002443	Death associated protein 3.	Mitochondrial ribosomal protein S22.	0.999
DAP3	MRPS27	ENSSARP00000011259	ENSSARP00000004489	Death associated protein 3.	Mitochondrial ribosomal protein S27.	0.998
DAP3	MRPS7	ENSSARP00000011259	ENSSARP00000002694	Death associated protein 3.	Mitochondrial ribosomal protein S7.	0.997
DAP3	MRPS9	ENSSARP00000011259	ENSSARP00000010227	Death associated protein 3.	Mitochondrial ribosomal protein S9.	0.999
ENSSARP00000002764	DAP3	ENSSARP00000002764	ENSSARP00000011259	annotation not available	Death associated protein 3.	0.998
ENSSARP00000002764	ENSSARP00000004064	ENSSARP00000002764	ENSSARP00000004064	annotation not available	annotation not available	0.999
ENSSARP00000002764	ENSSARP00000009489	ENSSARP00000002764	ENSSARP00000009489	annotation not available	annotation not available	0.999
ENSSARP00000002764	FAU	ENSSARP00000002764	ENSSARP00000010462	annotation not available	FAU ubiquitin like and ribosomal protein S30 fusion.	0.999
ENSSARP00000002764	MRPS12	ENSSARP00000002764	ENSSARP00000006321	annotation not available	28S ribosomal protein S12, mitochondrial.	0.999
ENSSARP00000002764	MRPS15	ENSSARP00000002764	ENSSARP00000010891	annotation not available	Mitochondrial ribosomal protein S15.	0.999
ENSSARP00000002764	MRPS22	ENSSARP00000002764	ENSSARP00000002443	annotation not available	Mitochondrial ribosomal protein S22.	0.996
ENSSARP00000002764	MRPS27	ENSSARP00000002764	ENSSARP00000004489	annotation not available	Mitochondrial ribosomal protein S27.	0.998
ENSSARP00000002764	MRPS7	ENSSARP00000002764	ENSSARP00000002694	annotation not available	Mitochondrial ribosomal protein S7.	0.999
ENSSARP00000002764	MRPS9	ENSSARP00000002764	ENSSARP00000010227	annotation not available	Mitochondrial ribosomal protein S9.	0.999
ENSSARP00000004064	DAP3	ENSSARP00000004064	ENSSARP00000011259	annotation not available	Death associated protein 3.	0.999