MBD4 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

MBD4

methyl-CpG binding domain 4, DNA glycosylase. (575 aa)

Predicted Functional Partners:

MTA2

0.902

ENSSARP00000012680

0.902

ENSSARP00000003075

0.864

RBBP7

0.864

ENSSARP00000003918

0.849

ARID4A

0.806

ARID4B

0.806

ENSSARP00000004900

0.790

HDAC2

0.787

ENSSARP00000003871

0.787

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ARID4A	ARID4B	ENSSARP00000006346	ENSSARP00000010804	AT-rich interaction domain 4A.	AT-rich interaction domain 4B.	0.729
ARID4A	ENSSARP00000003075	ENSSARP00000006346	ENSSARP00000003075	AT-rich interaction domain 4A.	annotation not available	0.994
ARID4A	ENSSARP00000003871	ENSSARP00000006346	ENSSARP00000003871	AT-rich interaction domain 4A.	annotation not available	0.984
ARID4A	ENSSARP00000003918	ENSSARP00000006346	ENSSARP00000003918	AT-rich interaction domain 4A.	annotation not available	0.852
ARID4A	ENSSARP00000004900	ENSSARP00000006346	ENSSARP00000004900	AT-rich interaction domain 4A.	annotation not available	0.527
ARID4A	ENSSARP00000012680	ENSSARP00000006346	ENSSARP00000012680	AT-rich interaction domain 4A.	annotation not available	0.874
ARID4A	HDAC2	ENSSARP00000006346	ENSSARP00000000316	AT-rich interaction domain 4A.	Histone deacetylase 2.	0.984
ARID4A	MBD4	ENSSARP00000006346	ENSSARP00000004075	AT-rich interaction domain 4A.	methyl-CpG binding domain 4, DNA glycosylase.	0.806
ARID4A	MTA2	ENSSARP00000006346	ENSSARP00000004346	AT-rich interaction domain 4A.	Metastasis associated 1 family member 2.	0.874
ARID4A	RBBP7	ENSSARP00000006346	ENSSARP00000007313	AT-rich interaction domain 4A.	RB binding protein 7, chromatin remodeling factor.	0.994
ARID4B	ARID4A	ENSSARP00000010804	ENSSARP00000006346	AT-rich interaction domain 4B.	AT-rich interaction domain 4A.	0.729
ARID4B	ENSSARP00000003075	ENSSARP00000010804	ENSSARP00000003075	AT-rich interaction domain 4B.	annotation not available	0.995
ARID4B	ENSSARP00000003871	ENSSARP00000010804	ENSSARP00000003871	AT-rich interaction domain 4B.	annotation not available	0.984
ARID4B	ENSSARP00000003918	ENSSARP00000010804	ENSSARP00000003918	AT-rich interaction domain 4B.	annotation not available	0.852
ARID4B	ENSSARP00000004900	ENSSARP00000010804	ENSSARP00000004900	AT-rich interaction domain 4B.	annotation not available	0.527
ARID4B	ENSSARP00000012680	ENSSARP00000010804	ENSSARP00000012680	AT-rich interaction domain 4B.	annotation not available	0.883
ARID4B	HDAC2	ENSSARP00000010804	ENSSARP00000000316	AT-rich interaction domain 4B.	Histone deacetylase 2.	0.984
ARID4B	MBD4	ENSSARP00000010804	ENSSARP00000004075	AT-rich interaction domain 4B.	methyl-CpG binding domain 4, DNA glycosylase.	0.806
ARID4B	MTA2	ENSSARP00000010804	ENSSARP00000004346	AT-rich interaction domain 4B.	Metastasis associated 1 family member 2.	0.877
ARID4B	RBBP7	ENSSARP00000010804	ENSSARP00000007313	AT-rich interaction domain 4B.	RB binding protein 7, chromatin remodeling factor.	0.996