Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLHC1Clathrin heavy chain linker domain containing 1. (601 aa)    
Predicted Functional Partners:
ENSSARP00000003538
annotation not available
   
 0.992
ITSN2
Intersectin 2.
   
 0.979
DNAJC6
DnaJ heat shock protein family (Hsp40) member C6.
   
 0.975
CLTA
Clathrin light chain A.
   
 0.946
ENSSARP00000000188
annotation not available
    
 0.938
ENSSARP00000001390
annotation not available
    
 0.929
AP2A1
Adaptor related protein complex 2 subunit alpha 1.
   
 0.881
SNAP91
Synaptosome associated protein 91.
    
 0.864
PICALM
Phosphatidylinositol binding clathrin assembly protein.
    
 0.864
AP2M1
Adaptor related protein complex 2 subunit mu 1.
   
 0.858
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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